Cherry SNP DataBase
SNP information
| Name |
Pav_sc0001392.1_279422R |
| Chr |
PAV_r1.0chr6 |
| Pos (Chr) |
2624798 |
| PAV_r1.0 |
Pav_sc0001392.1 |
| Pos (PAV_r1.0) |
279422 |
| REF |
A |
| ALT |
G |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.279422A>G |
| Amino Acid |
|
| PCR |
Forward primer |
GTGGACCTGACGTGGAAACT |
| Reverse primer |
AAAGATCACAGTCGGCCCTA |
| Product size |
270 |
| Enzymes for CAPS |
HhaI |
| Exp. fragment size (REF) |
70,200 |
| Exp. fragment size (ALT) |
70,82,118 |
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/ALT |
REF/REF |
REF/REF |
REF/REF |
REF/ALT |
ALT/ALT |
REF/REF |
| Top |