Cherry SNP DataBase

SNP information

Name Pav_sc0001405.1_424568Y
Chr PAV_r1.0chr2
Pos (Chr) 23317905
PAV_r1.0 Pav_sc0001405.1
Pos (PAV_r1.0) 424568
REF T
ALT C
SSR motif
Gene Name Pav_sc0001405.1_g870.1.mk
Annotation PREDICTED: DNA mismatch repair protein MSH3
snpEff Effect synonymous_variant
Impact LOW
Codon c.879A>G
Amino Acid p.Thr293Thr
PCR Forward primer TCAAAACATCAGGTGGGTGA
Reverse primer TTGGCAAAGGAAAAATTGGA
Product size 291
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF ALT/ALT REF/ALT REF/ALT REF/ALT ALT/ALT REF/ALT


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