Cherry SNP DataBase

SNP information

Name Pav_sc0001429.1_17703Y
Chr PAV_r1.0chr4
Pos (Chr) 11567127
PAV_r1.0 Pav_sc0001429.1
Pos (PAV_r1.0) 17703
REF C
ALT T
SSR motif
Gene Name Pav_sc0001429.1_g100.1.br
Annotation PREDICTED: BAHD acyltransferase At5g47980-like
snpEff Effect missense_variant
Impact MODERATE
Codon c.536C>T
Amino Acid p.Ala179Val
PCR Forward primer GGACAAACCAGATCTTGGGA
Reverse primer CAGAGTTTGCGTTGCCACTA
Product size 305
Enzymes for CAPS AfaI
Exp. fragment size (REF) 196,109
Exp. fragment size (ALT) 180,16,109
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF REF/REF


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