Cherry SNP DataBase

SNP information

Name Pav_sc0001529.1_67868M
Chr PAV_r1.0chr4
Pos (Chr) 216720
PAV_r1.0 Pav_sc0001529.1
Pos (PAV_r1.0) 67868
REF C
ALT A
SSR motif
Gene Name Pav_sc0001529.1_g140.1.mk
Annotation PREDICTED: sister chromatid cohesion protein PDS5 homolog A
snpEff Effect splice_region_variant&intron_variant
Impact LOW
Codon c.3789+6C>A
Amino Acid
PCR Forward primer AGCTGCACCTTCTTTCCCTT
Reverse primer TGAAGGGGATTTCTTTGACG
Product size 327
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT REF/REF REF/ALT REF/REF REF/ALT


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