Cherry SNP DataBase
SNP information
| Name |
Pav_sc0001545.1_56188S |
| Chr |
PAV_r1.0chr4 |
| Pos (Chr) |
1559611 |
| PAV_r1.0 |
Pav_sc0001545.1 |
| Pos (PAV_r1.0) |
56188 |
| REF |
G |
| ALT |
C |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.56188G>C |
| Amino Acid |
|
| PCR |
Forward primer |
CTACCAGCTACCACCTTCGG |
| Reverse primer |
TGTGGCAATGTTAGTCCGTT |
| Product size |
348 |
| Enzymes for CAPS |
AfaI |
| Exp. fragment size (REF) |
156,192 |
| Exp. fragment size (ALT) |
348 |
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/REF |
REF/REF |
REF/REF |
REF/REF |
REF/REF |
REF/ALT |
REF/REF |
| Top |