Cherry SNP DataBase

SNP information

Name Pav_sc0001583.1_73868R
Chr PAV_r1.0chr4
Pos (Chr) 9922460
PAV_r1.0 Pav_sc0001583.1
Pos (PAV_r1.0) 73868
REF A
ALT G
SSR motif
Gene Name Pav_sc0001583.1_g120.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
snpEff Effect synonymous_variant
Impact LOW
Codon c.2334A>G
Amino Acid p.Lys778Lys
PCR Forward primer TTGATGCCCCATGTATTTCA
Reverse primer GCTGCCTCCTGGAGAGTCTA
Product size 223
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF REF/REF


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