Cherry SNP DataBase

SNP information

Name Pav_sc0001699.1_7828W
Chr PAV_r1.0chr6
Pos (Chr) 20784068
PAV_r1.0 Pav_sc0001699.1
Pos (PAV_r1.0) 7828
REF T
ALT A
SSR motif
Gene Name Pav_sc0001699.1_g050.1.br
Annotation
snpEff Effect initiator_codon_variant
Impact LOW
Codon c.1A>T
Amino Acid p.Met1?
PCR Forward primer GGTGCTTGATATGCTCGGTT
Reverse primer AATTGTTGCAGGTGACTCCC
Product size 330
Enzymes for CAPS BglII
Exp. fragment size (REF) 330
Exp. fragment size (ALT) 120,210
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/ALT REF/ALT REF/ALT REF/ALT


| Top |