Cherry SNP DataBase

SNP information

Name Pav_sc0001710.1_189845R
Chr PAV_r1.0chr3
Pos (Chr) 4759405
PAV_r1.0 Pav_sc0001710.1
Pos (PAV_r1.0) 189845
REF G
ALT A
SSR motif
Gene Name Pav_sc0001710.1_g370.1.mk
Annotation PREDICTED: pentatricopeptide repeat-containing protein At3g16010 isoform X2
snpEff Effect splice_region_variant
Impact LOW
Codon c.*336C>T
Amino Acid
PCR Forward primer GTCCCCATGGGACTAGTGAA
Reverse primer TGCTGAAATGCAGAAGCTGT
Product size 230
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF


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