Cherry SNP DataBase
SNP information
| Name |
Pav_sc0001878.1_81243R |
| Chr |
PAV_r1.0chr1 |
| Pos (Chr) |
9964867 |
| PAV_r1.0 |
Pav_sc0001878.1 |
| Pos (PAV_r1.0) |
81243 |
| REF |
G |
| ALT |
A |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.81243G>A |
| Amino Acid |
|
| PCR |
Forward primer |
GAATGGAGTTGGTCCTCCAG |
| Reverse primer |
CACTATGCTGAGGTGGCTGA |
| Product size |
224 |
| Enzymes for CAPS |
HhaI |
| Exp. fragment size (REF) |
98,126 |
| Exp. fragment size (ALT) |
224 |
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/ALT |
REF/ALT |
ALT/ALT |
REF/ALT |
REF/REF |
ALT/ALT |
REF/ALT |
| Top |