| Name | Pav_sc0001953.1_17485R | ||
|---|---|---|---|
| Chr | PAV_r1.0chr4 | ||
| Pos (Chr) | 7865582 | ||
| PAV_r1.0 | Pav_sc0001953.1 | ||
| Pos (PAV_r1.0) | 17485 | ||
| REF | G | ||
| ALT | A | ||
| SSR motif | |||
| Gene | Name | Pav_sc0001953.1_g030.1.mk | |
| Annotation | PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic isoform X2 | ||
| snpEff | Effect | missense_variant | |
| Impact | MODERATE | ||
| Codon | c.538G>A | ||
| Amino Acid | p.Val180Ile | ||
| PCR | Forward primer | TGGAACTTGAAGATCGCAAA | |
| Reverse primer | CCTACAAGGCACAACCGAAT | ||
| Product size | 317 | ||
| Enzymes for CAPS | AfaI | ||
| Exp. fragment size (REF) | 100,217 | ||
| Exp. fragment size (ALT) | 317 | ||
| References | |||