Cherry SNP DataBase

SNP information

Name Pav_sc0001954.1_75506K
Chr PAV_r1.0chr2
Pos (Chr) 3644733
PAV_r1.0 Pav_sc0001954.1
Pos (PAV_r1.0) 75506
REF T
ALT G
SSR motif
Gene Name Pav_sc0001954.1_g150.1.mk
Annotation PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1159+473A>C
Amino Acid
PCR Forward primer TCATTCTGGCCGAGATGAAT
Reverse primer TATCAAGCCTGGTTGCCTCT
Product size 324
Enzymes for CAPS AfaI
Exp. fragment size (REF) 50,274
Exp. fragment size (ALT) 50,78,196
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/ALT REF/ALT REF/ALT REF/REF


| Top |