Cherry SNP DataBase

SNP information

Name Pav_sc0002233.1_140504K
Chr PAV_r1.0chr4
Pos (Chr) 397053
PAV_r1.0 Pav_sc0002233.1
Pos (PAV_r1.0) 140504
REF G
ALT T
SSR motif
Gene Name Pav_sc0002233.1_g280.1.mk
Annotation PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like
snpEff Effect synonymous_variant
Impact LOW
Codon c.675G>T
Amino Acid p.Val225Val
PCR Forward primer GAATTCCAGGCGATCAAAAA
Reverse primer CCTCTGACGGCCTCAACTAC
Product size 340
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF


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