Cherry SNP DataBase

SNP information

Name Pav_sc0002233.1_140542Y
Chr PAV_r1.0chr4
Pos (Chr) 397015
PAV_r1.0 Pav_sc0002233.1
Pos (PAV_r1.0) 140542
REF C
ALT T
SSR motif
Gene Name Pav_sc0002233.1_g280.1.mk
Annotation PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like
snpEff Effect missense_variant
Impact MODERATE
Codon c.713C>T
Amino Acid p.Ser238Leu
PCR Forward primer TTTGTGTCTGGCTTGCTGTC
Reverse primer AACAAACCGTCAGCAGGAAC
Product size 302
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT


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