Cherry SNP DataBase

SNP information

Name Pav_sc0002360.1_168064M
Chr PAV_r1.0chr3
Pos (Chr) 17375823
PAV_r1.0 Pav_sc0002360.1
Pos (PAV_r1.0) 168064
REF A
ALT C
SSR motif
Gene Name Pav_sc0002360.1_g300.1.mk
Annotation PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5
snpEff Effect intron_variant
Impact MODIFIER
Codon c.435-21A>C
Amino Acid
PCR Forward primer CGCACAGACCACTCTTCAAA
Reverse primer TGTGGCTGTTCCTGCTGTTA
Product size 332
Enzymes for CAPS AluI
Exp. fragment size (REF) 38,294
Exp. fragment size (ALT) 38,176,118
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/REF REF/ALT REF/ALT


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