Cherry SNP DataBase

SNP information

Name Pav_sc0002893.1_118379W
Chr PAV_r1.0chr1
Pos (Chr) 20075612
PAV_r1.0 Pav_sc0002893.1
Pos (PAV_r1.0) 118379
REF A
ALT T
SSR motif
Gene Name Pav_sc0002893.1_g310.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: alpha-glucan water dikinase, chloroplastic
snpEff Effect intron_variant
Impact MODIFIER
Codon c.2134-44T>A
Amino Acid
PCR Forward primer GGATTCCCCGATCATAGCTT
Reverse primer ATGGAGGAATGGCATCAAAA
Product size 261
Enzymes for CAPS DraI
Exp. fragment size (REF) 146,6,109
Exp. fragment size (ALT) 146,7,108
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/ALT REF/ALT REF/REF ALT/ALT REF/REF


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