Cherry SNP DataBase

SNP information

Name Pav_sc0003098.1_89120R
Chr PAV_r1.0chr1
Pos (Chr) 8240122
PAV_r1.0 Pav_sc0003098.1
Pos (PAV_r1.0) 89120
REF G
ALT A
SSR motif
Gene Name Pav_sc0003098.1_g210.1.br
Annotation PREDICTED: LOW QUALITY PROTEIN: phylloplanin-like
snpEff Effect missense_variant
Impact MODERATE
Codon c.5C>T
Amino Acid p.Thr2Ile
PCR Forward primer GACCTGGGATCCTCATCAAT
Reverse primer GCACAACAATTCTGCAAGTCA
Product size 349
Enzymes for CAPS MboI
Exp. fragment size (REF) 7,194,148
Exp. fragment size (ALT) 7,85,109,148
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT ALT/ALT REF/REF REF/REF ALT/ALT REF/REF REF/ALT


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