Cherry SNP DataBase

SNP information

Name Pav_sc0003155.1_25658Y
Chr PAV_r1.0chr8
Pos (Chr) 7679523
PAV_r1.0 Pav_sc0003155.1
Pos (PAV_r1.0) 25658
REF T
ALT C
SSR motif
Gene Name Pav_sc0003155.1_g060.1.br
Annotation PREDICTED: putative disease resistance protein RGA1 isoform X2
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1079-29A>G
Amino Acid
PCR Forward primer ATGTCTTCTGGTCGCTTGCT
Reverse primer AGAGGAGCAGCAGTGGTTGT
Product size 240
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT ALT/ALT REF/ALT ALT/ALT ALT/ALT ALT/ALT REF/ALT


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