Cherry SNP DataBase

SNP information

Name Pav_sc0003708.1_49838S
Chr PAV_r1.0chr2
Pos (Chr) 5641227
PAV_r1.0 Pav_sc0003708.1
Pos (PAV_r1.0) 49838
REF G
ALT C
SSR motif
Gene Name Pav_sc0003708.1_g110.1.mk
Annotation PREDICTED: zinc finger CCCH domain-containing protein 69
snpEff Effect missense_variant
Impact MODERATE
Codon c.320G>C
Amino Acid p.Ser107Thr
PCR Forward primer TGGCTCATCCTTCAAGAACC
Reverse primer CATATGCTCCTCCCTTTCCA
Product size 338
Enzymes for CAPS AfaI
Exp. fragment size (REF) 185,153
Exp. fragment size (ALT) 77,108,153
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF REF/ALT REF/ALT REF/REF


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