Cherry SNP DataBase
SNP information
| Name |
Pav_sc0004043.1_19649M |
| Chr |
PAV_r1.0chr8 |
| Pos (Chr) |
1582272 |
| PAV_r1.0 |
Pav_sc0004043.1 |
| Pos (PAV_r1.0) |
19649 |
| REF |
A |
| ALT |
C |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.19649A>C |
| Amino Acid |
|
| PCR |
Forward primer |
TAGCTTGGGATTCATGCTGG |
| Reverse primer |
TGGAAGGAGAGGTCGTCTTG |
| Product size |
298 |
| Enzymes for CAPS |
|
| Exp. fragment size (REF) |
|
| Exp. fragment size (ALT) |
|
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/ALT |
ALT/ALT |
REF/ALT |
ALT/ALT |
ALT/ALT |
ALT/ALT |
REF/ALT |
| Top |