Cherry SNP DataBase

SNP information

Name Pav_sc0006959.1_11041K
Chr PAV_r1.0chr7
Pos (Chr) 17574763
PAV_r1.0 Pav_sc0006959.1
Pos (PAV_r1.0) 11041
REF T
ALT G
SSR motif
Gene Name Pav_sc0006959.1_g040.1.mk
Annotation hypothetical protein AALP_AA8G214600
snpEff Effect synonymous_variant
Impact LOW
Codon c.1506T>G
Amino Acid p.Pro502Pro
PCR Forward primer ATTGGCTTTCTTCTTCCGGT
Reverse primer CTGCTGGCTGTTGCTCATAA
Product size 248
Enzymes for CAPS MspI
Exp. fragment size (REF) 16,232
Exp. fragment size (ALT) 16,52,180
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/ALT REF/ALT REF/REF REF/ALT REF/REF


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