Cherry SNP DataBase

SNP information

Name Pav_sc0008542.1_9920Y
Chr PAV_r1.0chr6
Pos (Chr) 8732513
PAV_r1.0 Pav_sc0008542.1
Pos (PAV_r1.0) 9920
REF T
ALT C
SSR motif
Gene Name Pav_sc0008542.1_g030.1.mk
Annotation PREDICTED: pleiotropic drug resistance protein 2-like isoform X3
snpEff Effect synonymous_variant
Impact LOW
Codon c.585T>C
Amino Acid p.Tyr195Tyr
PCR Forward primer TCTCAACCTCCTTCCCATTG
Reverse primer GAAAAACCGGATTGCATTGT
Product size 233
Enzymes for CAPS AfaI
Exp. fragment size (REF) 233
Exp. fragment size (ALT) 138,95
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT REF/ALT ALT/ALT ALT/ALT REF/ALT ALT/ALT REF/ALT


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